公衍海 gongyh@qibebt.ac.cn 硕士/助理研究员 生物信息研究组

教育与研究背景

2014/07-至今，中国科学院青岛生物能源与过程研究所，单细胞中心

2011/08-2014/07，清华大学，控制科学与工程，硕士

2005/09-2009/07，中国石油大学（华东），自动化，本科

研究方向

生物信息学、真核微藻系统生物学、微生物单细胞组学

生物信息学软件与数据库

NanDeSyn (微拟球藻多组学数据库系统): https://nandesyn.single-cell.cn 或 http://nandesyn.org

SCHOOL (单细胞基因组测序数据分析云平台): https://school.single-cell.cn （暂未对外开放）

开源代码库: https://github.com/gongyh?tab=repositories

代表性文章

Gong, Y.*, Kang, N.K.*, Kim, Y.U., Wang, Z., ..., Chang, Y.K.#, Jeong, W.-J.#, Jeong, B.-r.# and Xu, J.# (2020). The NanDeSyn database for Nannochloropsis systems and synthetic biology. Plant J., 104: 1736-1745. doi: 10.1111/tpj.15025

Xu, T.*, Gong, Y.*, Su, X.*, Zhu, P., Dai, J., Xu, J.#, Ma, B.# (2020). Phenome-Genome Profiling of Single Bacterial Cell by Raman-Activated Gravity-Driven Encapsulation and Sequencing. Small, 16, 2001172. doi: 10.1002/smll.202001172

Su, X.*, Gong, Y.*, Gou, H., Jing, X., Xu, T., Zheng, X., Chen, R., Li, Y., Ji, Y., Ma, B., Xu, J. (2020). Rational Optimization of Raman-Activated Cell Ejection and Sequencing for Bacteria. Analytical Chemistry, 92 (12), 8081-8089. doi: 10.1021/acs.analchem.9b05345

Jing, X.*, Gong, Y.*, Xu, T.*, Meng, Y., Han, X., Su, X., Wang, J., Ji, Y., Li, Y., Jia, Z., Ma, B.#, Xu, J.# (2021). One-cell metabolic phenotyping and sequencing of soil microbiome by Raman-activated gravity-driven encapsulation (RAGE). mSystems 6: e00181-21. doi: 10.1128/mSystems.00181-21

Jing, X.*, Gou, H.*, Gong, Y.*, Su, X., Xu, L., Ji, Y., Song, Y., Thompson, I.P., Xu, J.#, Huang, W.E.# (2018). Raman-activated cell sorting and metagenomic sequencing revealing carbon-fixing bacteria in the ocean. Environ Microbiol, 20: 2241-2255. doi: 10.1111/1462-2920.14268